ZFIN ID: ZDB-GENE-070521-2

Mapping Details

Gene Name: AT hook containing transcription factor 1
Symbol: ahctf1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 17 13,423,291 - 13,451,753 GRCz12tu
NCBI Map Viewer 17 13,423,291 - 13,451,753 GRCz12tu
Ensembl 17 12,221,902 - 12,249,990 GRCz11
NCBI Map Viewer 17 12,221,473 - 12,249,963 GRCz11
Vega 17 12,067,836 - 12,095,924 GRCv10
Mapped Clones containing ahctf1
DKEY-3I24 Chr: 17 Details
RP71-84D9 Chr: 17 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa664 17 13,438,653 GRCz12tu DIRECT Sealy et al., 2025
17 12,236,838 GRCz11 DIRECT Busch-Nentwich et al., 2013
17 12,082,772 GRCz10 DIRECT Busch-Nentwich et al., 2013
17 12,100,250 Zv9 DIRECT Busch-Nentwich et al., 2013
sa9115 17 13,438,910 GRCz12tu DIRECT Sealy et al., 2025
17 12,237,095 GRCz11 DIRECT Busch-Nentwich et al., 2013
17 12,083,029 GRCz10 DIRECT Busch-Nentwich et al., 2013
17 12,100,507 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23014 17 13,438,915 GRCz12tu DIRECT Sealy et al., 2025
17 12,237,100 GRCz11 DIRECT Busch-Nentwich et al., 2013
17 12,083,034 GRCz10 DIRECT Busch-Nentwich et al., 2013
17 12,100,512 Zv9 DIRECT Busch-Nentwich et al., 2013
sa28817 17 13,429,568 GRCz12tu DIRECT Sealy et al., 2025
17 12,227,753 GRCz11 DIRECT Busch-Nentwich et al., 2013
17 12,073,687 GRCz10 DIRECT Busch-Nentwich et al., 2013
17 12,091,165 Zv9 DIRECT Busch-Nentwich et al., 2013
sa32129 17 13,431,280 GRCz12tu DIRECT Sealy et al., 2025
17 12,229,465 GRCz11 DIRECT Busch-Nentwich et al., 2013
17 12,075,399 GRCz10 DIRECT Busch-Nentwich et al., 2013
17 12,092,877 Zv9 DIRECT Busch-Nentwich et al., 2013
ti262c 17 12,227,705 GRCz11 DIRECT Davuluri et al., 2008
tsu13i7d 17 12,241,634 - 12,241,640 GRCz11 DIRECT Zebrafish Nomenclature Committee
tsu14i1d 17 12,241,638 GRCz11 DIRECT Shen et al., 2022
ti262c 17 GRCz11 GENERAL_LOAD load data [singleton]
s871 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa664 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa9115 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa23014 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa28817 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa32129 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ti262c 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING directMappedMarker
14 GRCz11 OTHER_MAPPING paneledMarkersDirect
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
17 GRCz11 OTHER_MAPPING linkagesDirectMem1
17 GRCz11 OTHER_MAPPING linkagesDirectMem2
tsu13i7d 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
tsu14i1d 17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
17 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION
Markers Encoded by ahctf1
fa02e01 Chr: 17 Details
wz11290 Chr: 17 Details
Genomic Feature ti262c is an allele of ahctf1
Chr Location Mapped As Panel Mapped By Scoring
14 71.1 cM ti262c Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature ti262c is an allele of ahctf1
Marker Type Chr Distance Publication / Person Comments
z24006 SSLP 17 Davuluri et al., 2008 Davuluri et al. (2008.PLoS Genet. 4(10): e1000240) report mapping elys to LG  ...
z24082 SSLP 17 Davuluri et al., 2008 Davuluri et al. (2008.PLoS Genet. 4(10): e1000240) report mapping elys to LG  ...
z54789 SSLP 17 Davuluri et al., 2008 Davuluri et al. (2008.PLoS Genet. 4(10): e1000240) report mapping elys to LG  ...
Genomic Feature ti262c is an allele of ahctf1
Chr 17 Davuluri et al., 2008 Davuluri et al. (2008.PLoS Genet. 4(10): e1000240) report mapping elys to LG 17, between SSLP  ...
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