ZFIN ID: ZDB-GENE-980526-304

Mapping Details

Gene Name: IKAROS family zinc finger 1 (Ikaros)
Symbol: ikzf1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 13 17,938,091 - 17,975,075 GRCz12tu
NCBI Map Viewer 13 17,938,091 - 17,975,075 GRCz12tu
Ensembl 13 15,957,882 - 15,994,472 GRCz11
NCBI Map Viewer 13 15,957,852 - 15,994,717 GRCz11
UCSC 13 - GRCz11
Vega 13 15,826,890 - 15,863,480 GRCv10
Mapped Clones containing ikzf1
CH211-57F7 Chr: 13 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
fr105 13 15,962,388 - 15,966,005 GRCz11 DIRECT Hess et al., 2022
sa11269 13 17,946,222 GRCz12tu DIRECT Sealy et al., 2025
13 15,965,983 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 15,834,991 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 15,919,958 Zv9 DIRECT Busch-Nentwich et al., 2013
sa22255 13 17,939,350 GRCz12tu DIRECT Sealy et al., 2025
13 15,959,111 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 15,828,119 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 15,913,086 Zv9 DIRECT Busch-Nentwich et al., 2013
sa22256 13 17,942,566 GRCz12tu DIRECT Sealy et al., 2025
13 15,962,327 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 15,831,335 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 15,916,302 Zv9 DIRECT Busch-Nentwich et al., 2013
sa31915 13 17,974,642 GRCz12tu DIRECT Sealy et al., 2025
13 15,994,403 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 15,863,411 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 15,948,378 Zv9 DIRECT Busch-Nentwich et al., 2013
t24980 13 15,959,020 GRCz11 DIRECT Schorpp et al., 2006
zf3330 13 15,982,653 - 15,982,656 GRCz11 DIRECT Huang et al., 2019
zf3331 13 15,958,909 - 15,958,910 GRCz11 DIRECT Huang et al., 2019
t24980 13 GRCz11 GENERAL_LOAD load data [singleton]
fr105 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa11269 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa22255 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa22256 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa31915 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
t24980 13 GRCz11 OTHER_MAPPING linkagesDirectMem2
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
13 GRCz11 OTHER_MAPPING linkagesDirectMem1
t25880 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf3330 13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf3331 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
13 77.1 cM ikaros Mother of Pearl (MOP) Postlethwait, John H. Data
13 239.64 cR ikaros Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
13 43.0 cM znfn1a1 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Genomic Feature t24980 is an allele of ikzf1
Marker Type Chr Distance Publication / Person Comments
z13250 SSLP 13 Schorpp et al., 2006 Schorpp et al. (2006, J. Immunol. 177(4):2463-2476) mapped t24980 to Chr. 13.
z5395 SSLP 13 Schorpp et al., 2006 Schorpp et al. (2006, J. Immunol. 177(4):2463-2476) mapped t24980 to Chr. 13.
Genomic Feature t24980 is an allele of ikzf1
Chr 13 Schorpp et al., 2006 Schorpp et al. (2006, J. Immunol. 177(4):2463-2476) mapped t24980 to Chr. 13.
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