ZFIN ID: ZDB-GENE-980526-484

Mapping Details

Gene Name:	LIM homeobox 5
Symbol:	lhx5

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	21	17,321,875 - 17,337,990	GRCz12tu
NCBI Map Viewer	21	17,321,875 - 17,337,990	GRCz12tu
Ensembl	21	15,913,128 - 15,929,041	GRCz11
NCBI Map Viewer	21	15,913,130 - 15,929,011	GRCz11
UCSC	21	-	GRCz11
Vega	21	15,817,151 - 15,833,064	GRCv10

Mapped Clones containing lhx5
DKEY-60I9	Chr: 21 Details
CH211-32G22	Chr: 21 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
nub95	21	15,928,673 - 15,928,682	GRCz11	DIRECT		Itoh et al., 2024
sa23894	21	17,331,987	GRCz12tu	DIRECT		Sealy et al., 2025
	21	15,923,064	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	21	15,827,087	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	21	14,126,132	Zv9	DIRECT		Busch-Nentwich et al., 2013
la021831Tg	21	14,127,023 - 14,127,033	Zv9	ZFIN_Zv9	BurgessLin
la021832Tg	21	14,128,899 - 14,128,909	Zv9	ZFIN_Zv9	BurgessLin
la021831Tg	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la021832Tg	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
nub95	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa23894	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	21		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	21		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
21	66.3 cM	lim5	Mother of Pearl (MOP)	Postlethwait, John H.	Data
21	122.09 cR	lim5	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
21	1379.0 cR	lim5	Goodfellow T51 (T51)	Geisler, Robert	Data
21	55.1 cM	lim5	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available