Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
17	43.5 cM	z21435	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
17	251.25 cR	Z21435	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
17	2626.0 cR	z21435	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
fa04b12	EST	17		Hansen et al., 2003	Hansen I.A. et al. (Biochem Biophys Res Commun 303(2003): 1121-1128) mapped  ... Hansen I.A. et al. (Biochem Biophys Res Commun 303(2003): 1121-1128) mapped the pomc gene to LG17 between fd59g01 and fa04b12 at a distance of 16.37 cR from Z21435, using the LN54 radiation hybrid panel.
fd59g01	EST	17		Hansen et al., 2003	Hansen I.A. et al. (Biochem Biophys Res Commun 303(2003): 1121-1128) mapped  ... Hansen I.A. et al. (Biochem Biophys Res Commun 303(2003): 1121-1128) mapped the pomc gene to LG17 between fd59g01 and fa04b12 at a distance of 16.37 cR from Z21435, using the LN54 radiation hybrid panel.
pomca	GENE	17	16.37 cR	Hansen et al., 2003	Hansen I.A. et al. (Biochem Biophys Res Commun 303(2003): 1121-1128) mapped  ... Hansen I.A. et al. (Biochem Biophys Res Commun 303(2003): 1121-1128) mapped the pomc gene to LG17 between fd59g01 and fa04b12 at a distance of 16.37 cR from Z21435, using the LN54 radiation hybrid panel.
t31954	Feature	17	0.11 cM	Lobbardi et al., 2011
qkia	GENE	17		Lobbardi et al., 2011
z9633	SSLP	17		Lobbardi et al., 2011

OTHER MAPPING INFORMATION

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	0,278		60.0
Forward Primer	GGGCATGCAGAAAGAATGTT
Reverse Primer	TCTCCCTCTTTTGCTGGCTA
IND	270		60.0
Forward Primer	GGGCATGCAGAAAGAATGTT
Reverse Primer	TCTCCCTCTTTTGCTGGCTA
EKW	0,296		60.0
Forward Primer	GGGCATGCAGAAAGAATGTT
Reverse Primer	TCTCCCTCTTTTGCTGGCTA
TU	340		60.0
Forward Primer	GGGCATGCAGAAAGAATGTT
Reverse Primer	TCTCCCTCTTTTGCTGGCTA