ZFIN is now using GRCz12tu for Genomic Data
Gene

per1b

ID
ZDB-GENE-040419-1
Name
period circadian clock 1b
Symbol
per1b Nomenclature History
Previous Names
  • per4
  • zfper4 (1)
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable transcription cis-regulatory region binding activity and transcription corepressor binding activity. Acts upstream of or within several processes, including dopaminergic neuron differentiation; positive regulation of dopaminergic neuron differentiation; and visual perception. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including heart; liver; muscle; ovary; and retina. Used to study attention deficit hyperactivity disorder. Orthologous to human PER1 (period circadian regulator 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
39 figures from 26 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
13 figures from 5 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With per1b Human Ortholog
No data available
Associated With per1b Via Experimental Models
Human Disease Fish Conditions Citations
attention deficit hyperactivity disorder per1bsus001Tg/sus001Tg standard conditions Huang et al., 2015
attention deficit hyperactivity disorder per1bsus001Tg/sus001Tg (AB) standard conditions Nie et al., 2017
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000014 PAS domain
Domain IPR022728 Period circadian-like, C-terminal
Domain IPR048814 Period circadian protein homolog 1-3, PAS-A domain
Domain IPR057310 Period circadian protein homolog PER 1-3, bHLH-like domain
Family IPR050760 Period circadian regulator
Homologous_superfamily IPR035965 PAS domain superfamily
Domain Details Per Protein
Protein Additional Resources Length PAS domain PAS domain superfamily Period circadian-like, C-terminal Period circadian protein homolog 1-3, PAS-A domain Period circadian protein homolog PER 1-3, bHLH-like domain Period circadian regulator
UniProtKB:Q6E2N4 InterPro 1398
UniProtKB:A0A8M1PH02 InterPro 1398
UniProtKB:A0AC58FYL0 InterPro 1398
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA per1b-201 (1)
Ensembl
Ensembl 6,777 nt
ZFIN BLAST
mRNA per1b-202 (1)
Ensembl
Ensembl 7,625 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-per1b monoclonal Mouse
  • IHC
 2
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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