ZFIN is now using GRCz12tu for Genomic Data
Gene
nckap1l
- ID
- ZDB-GENE-080204-117
- Name
- NCK associated protein 1 like
- Symbol
- nckap1l Nomenclature History
- Previous Names
-
- zgc:172352 (1)
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within intrahepatic bile duct development. Predicted to be part of SCAR complex. Human ortholog(s) of this gene implicated in immunodeficiency 72. Orthologous to human NCKAP1L (NCK associated protein 1 like).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Castro et al., 2020
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| immunodeficiency 72 | Alliance | Immunodeficiency 72 with autoinflammation | 618982 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR019137 | Nck-associated protein 1 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nck-associated protein 1 |
|---|---|---|---|
| UniProtKB:A9JRH8 | InterPro | 1123 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
nckap1l-201
(1)
|
Ensembl | 3,372 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab2-nckap1l | polyclonal | Rabbit |
|
Thermo Fisher Scientific (Lab Vision)
|
1 |
Plasmids
No data available
- Genome Browsers