ZFIN is now using GRCz12tu for Genomic Data
Gene
ranbp2
- ID
- ZDB-GENE-081104-93
- Name
- RAN binding protein 2
- Symbol
- ranbp2 Nomenclature History
- Previous Names
-
- nup358 (1)
- si:ch1073-55a19.2
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables SUMO ligase activity. Predicted to be involved in NLS-bearing protein import into nucleus. Predicted to act upstream of or within protein peptidyl-prolyl isomerization. Is active in annulate lamellae. Is expressed widely. Human ortholog(s) of this gene implicated in brain disease and inflammatory myofibroblastic tumor. Orthologous to several human genes including RANBP2 (RAN binding protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Magre et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Magre et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| {Encephalopathy, acute, infection-induced, 3, susceptibility to} | 608033 |
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
| Protein | Additional Resources | Length |
|---|---|---|
| UniProtKB:A0A8M9QJW3 | InterPro | 2984 |
| UniProtKB:A0A8M1RKE0 | InterPro | 2958 |
| UniProtKB:A0A8M9QFP1 | InterPro | 2968 |
| UniProtKB:A0AC58GFB3 | InterPro | 2720 |
| UniProtKB:A0AC58GFB4 | InterPro | 2746 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ranbp2-201
(1)
|
Ensembl | 9,214 nt | ||
| mRNA |
ranbp2-202
(1)
|
Ensembl | 8,862 nt | ||
| mRNA |
ranbp2-203
(1)
|
Ensembl | 8,811 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-ranbp2 | polyclonal | Rabbit |
|
1 |
Plasmids
No data available
- Genome Browsers