ZFIN is now using GRCz12tu for Genomic Data
Gene
hoxa10b
- ID
- ZDB-GENE-990415-97
- Name
- homeobox A10b
- Symbol
- hoxa10b Nomenclature History
- Previous Names
-
- Hoxa-10
- hoxa10
- z-140
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be active in nucleus. Is expressed in several structures, including CNS interneuron; chondroblast; mesenchyme; myoblast; and pectoral fin bud. Orthologous to human HOXA10 (homeobox A10).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 13 figures from 9 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Homedomain-like superfamily | Homeobox, conserved site | Homeobox protein Hox-A10/abdominal-B-like | Homeodomain | Homeodomain, metazoa |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2B4B4 | InterPro | 346 | |||||
| UniProtKB:Q8AWY2 | InterPro | 330 | |||||
| UniProtKB:B3DGC1 | InterPro | 330 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hoxa10b-201
(1)
|
Ensembl | 1,649 nt | ||
| mRNA | ottdart00000001853 (1) | Havana | 1,232 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers