ZFIN is now using GRCz12tu for Genomic Data
Gene
tbx16
- ID
- ZDB-GENE-990615-5
- Name
- T-box transcription factor 16
- Symbol
- tbx16 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables transcription cis-regulatory region binding activity. Acts upstream of or within several processes, including convergent extension; gastrulation; and tube morphogenesis. Located in chromatin and nucleus. Is expressed in several structures, including forerunner cell group; germ ring; mesoderm; presumptive mesoderm; and spinal cord.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 94 figures from 67 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb103 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- 61 figures from 34 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018186 | Transcription factor, T-box, conserved site |
| Domain | IPR046360 | T-box transcription factor, DNA-binding domain |
| Family | IPR001699 | T-box transcription factor |
| Homologous_superfamily | IPR008967 | p53-like transcription factor, DNA-binding domain superfamily |
| Homologous_superfamily | IPR036960 | T-box superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | p53-like transcription factor, DNA-binding domain superfamily | T-box superfamily | T-box transcription factor | T-box transcription factor, DNA-binding domain | Transcription factor, T-box, conserved site |
|---|---|---|---|---|---|---|---|
| UniProtKB:O93389 | InterPro | 470 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers