Transcript

zgc:162939-005

ID

ZDB-TSCRIPT-090929-16371

Name

zgc:162939-005 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

aopep (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000134046 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000134046.2|gene_biotype:protein_coding|ENSDARG00000068461.7 transcript_biotype:retained_intron cdna chromosome:GRCz11:8:30252398:30284448:-1
TTGATGTTCTTTCAGGGTGGCTGAGTTTTATAACATGTTA
TAACTAGATCAGAGCTGAATGCAGAGCTCTGAACGCTCAG
CACCCGCTGCAACATTATAACCACTGATTTGCTAGTTAAC
CAAATACAACTGTGATGTTCAATCCTAGTCTGTTTTCTTT
TTTTGTTAATTCTTTTTTTAAATGCTAAAATAAATCAATC
AACTGTGATTTCACTTGTTTTCCAGTCCACATATCGTGTT
CCTGTCTCAAAGTGTGCTAACTGGTGAGAGGAACCTCTGT
GGGGCAAGGTTATGCCATGAAATTGCCCATTCCTGGTTCG
GGCTGGCCATTGGAGCACGGGATTGGACAGAAGAATGGAT
CAGCGAGGGCTTCGCTACTTACTTAGAGGATGTTTTCTGG
AGCCACGTTCAGAAGTTGGGCTGTAGAGAGGCTGAGGAGC
AGAGACAGTTAAAGGCTTTGCTGCGCTGGAGGAGATTGAG
TGATGAGTTGCAGAACTCTGAAGAAGAGCTGCAGGTCCTC
AGGCCCAATAAAGAGAACACAGGGGAAGTGAGCGAGTCCG
GTGCGTCAGTTGTGAAGCATGCCCTCAACCCAGAAAAACC
CTTCATGCAGGTGCACTATTTGAAGGGCTACTTCCTCTTG
AAGTTTCTGGCTGATCAGATCGGCGAGGAGAAGTTCCTGC
AATTCTTCAAAGTGTTTGTTGGAAAATTCCACGGGCAGCT
AATTCTGTCTCAGGATTTTCTGCAGATGCTTCTGGACGCA
TTTCCAGCAATGAGCAGCCAGGGCATCGCACTTGAAACCA
TCTTTTCAGACTGGTTAGATACAC

OTTDART00000035786 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000035786|OTTDARG00000026818|ZDB-GENE-070410-115 zgc:162939|no_translation DKEY-185L9.2-005 LG_none CR847548.8,CT027611.9 Danio rerio protein_coding KNOWN, 824 bp
TTGATGTTCTTTCAGGGTGGCTGAGTTTTATAACATGTTA
TAACTAGATCAGAGCTGAATGCAGAGCTCTGAACGCTCAG
CACCCGCTGCAACATTATAACCACTGATTTGCTAGTTAAC
CAAATACAACTGTGATGTTCAATCCTAGTCTGTTTTCTTT
TTTTGTTAATTCTTTTTTTAAATGCTAAAATAAATCAATC
AACTGTGATTTCACTTGTTTTCCAGTCCACATATCGTGTT
CCTGTCTCAAAGTGTGCTAACTGGTGAGAGGAACCTCTGT
GGGGCAAGGTTATGCCATGAAATTGCCCATTCCTGGTTCG
GGCTGGCCATTGGAGCACGGGATTGGACAGAAGAATGGAT
CAGCGAGGGCTTCGCTACTTACTTAGAGGATGTTTTCTGG
AGCCACGTTCAGAAGTTGGGCTGTAGAGAGGCTGAGGAGC
AGAGACAGTTAAAGGCTTTGCTGCGCTGGAGGAGATTGAG
TGATGAGTTGCAGAACTCTGAAGAAGAGCTGCAGGTCCTC
AGGCCCAATAAAGAGAACACAGGGGAAGTGAGCGAGTCCG
GTGCGTCAGTTGTGAAGCATGCCCTCAACCCAGAAAAACC
CTTCATGCAGGTGCACTATTTGAAGGGCTACTTCCTCTTG
AAGTTTCTGGCTGATCAGATCGGCGAGGAGAAGTTCCTGC
AATTCTTCAAAGTGTTTGTTGGAAAATTCCACGGGCAGCT
AATTCTGTCTCAGGATTTTCTGCAGATGCTTCTGGACGCA
TTTCCAGCAATGAGCAGCCAGGGCATCGCACTTGAAACCA
TCTTTTCAGACTGGTTAGATACAC

Related Transcripts

Transcripts related to aopep

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	aopep-206 (1) Ensembl	Ensembl	2,364 nt	Select Tool ZFIN BLAST
mRNA	zgc:162939-201 (1) Ensembl	Ensembl	2,626 nt	Select Tool ZFIN BLAST
mRNA	zgc:162939-202 (1) Ensembl	Ensembl	799 nt	Select Tool ZFIN BLAST
mRNA	zgc:162939-204 (1) Ensembl	Ensembl	760 nt	Select Tool ZFIN BLAST
mRNA	zgc:162939-205 (1) Ensembl	Ensembl	987 nt	Select Tool ZFIN BLAST
ncRNA	zgc:162939-005	Ensembl	824 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations