ZFIN ID: ZDB-GENE-030828-12

ZFIN ID: ZDB-GENE-030828-12

Mapping Details

Gene Name:	heat shock protein 9
Symbol:	hspa9

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	14	12,703,493 - 12,728,198	GRCz12tu
NCBI Map Viewer	14	12,703,493 - 12,728,198	GRCz12tu
Ensembl	14	12,142,828 - 12,168,897	GRCz11
NCBI Map Viewer	14	12,142,929 - 12,167,631	GRCz11
UCSC	14	-	GRCz11
Vega	14	11,836,799 - 11,862,883	GRCv10

Mapped Clones containing hspa9
BUSM1-87D10	Unmapped
CH211-194M19	Chr: 14 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi2473Tg	14	12,142,991 - 12,142,992	GRCz11	DIRECT		ZFIN Curated Data
hi3366Tg	14	12,144,129 - 12,144,130	GRCz11	DIRECT		ZFIN Curated Data
sa45508	14	12,725,097	GRCz12tu	DIRECT		Sealy et al., 2025
	14	12,164,530	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	14	11,858,516	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	14	12,422,743	Zv9	DIRECT		Busch-Nentwich et al., 2013
hi2473Tg	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	14		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
hi3366Tg	14		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
hspa9_unspecified	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	14		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa45508	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	14		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
14	52.9 cM	hspa9b	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z26376	SSLP	14	0.36 cM	Craven et al., 2005	hspa9b was mapped between z43267 (0.36 cM, 8 of 2239 recombinants) and z26376.
z43267	SSLP	14		Craven et al., 2005	hspa9b was mapped between z43267 (0.36 cM, 8 of 2239 recombinants) and z26376.

Markers Encoded by hspa9
fc27c10 Chr: 14 Details
fc14d08 Chr: 14 Details

Genomic Feature hi2473Tg is an allele of hspa9