ZFIN ID: ZDB-GENE-990415-4

ZFIN ID: ZDB-GENE-990415-4

Mapping Details

Gene Name:	homeobox A11b
Symbol:	hoxa11b

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	16	22,256,213 - 22,257,812	GRCz12tu
NCBI Map Viewer	16	22,256,213 - 22,257,812	GRCz12tu
Ensembl	16	20,904,754 - 20,907,378	GRCz11
NCBI Map Viewer	16	20,904,884 - 20,906,482	GRCz11
UCSC	16	-	GRCz11
Vega	16	21,098,935 - 21,101,559	GRCv10

Mapped Clones containing hoxa11b
DKEY-45E15	Chr: 16 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
mh142	16	20,904,911 - 20,905,002	GRCz11	DIRECT		Hawkins et al., 2021
mh143	16	20,904,998 - 20,905,002	GRCz11	DIRECT		Hawkins et al., 2021
mh144	16	20,904,902 - 20,905,007	GRCz11	DIRECT		Hawkins et al., 2021
ihb434	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
ihb435	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
mh142	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
mh143	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
mh144	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
mh208Tg	16		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	16		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
16	53.7 cM	hoxa11b	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
hoxa10b	GENE	16	Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxa13b, hoxa11b, hoxa10b, hoxa9b, and hoxa2b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG16.
hoxa2b	GENE	16	Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxa13b, hoxa11b, hoxa10b, hoxa9b, and hoxa2b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG16.
hoxa13b	GENE	16	Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxa13b, hoxa11b, hoxa10b, hoxa9b, and hoxa2b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG16.
hoxa9b	GENE	16	Amores et al., 1998	Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxa13b, hoxa11b, hoxa10b, hoxa9b, and hoxa2b are clustered on a continuous region of the genome. Subsequent mapping of one or more of these genes localize all to LG16.

Chr 16

Amores et al., 1998

Using overlapping PAC clones, Amores, et al. (1998. Science 282:1711-1714.) report hoxa13b, ...